Package: anfo (0.98-7)

[ Source: anfo  ]

Short Read Aligner/Mapper from MPG

Anfo is a mapper in the spirit of Soap/Maq/Bowtie, but its implementation takes more after BLAST/BLAT. It's most useful for the alignment of sequencing reads where the DNA sequence is somehow modified (think ancient DNA or bisulphite treatment) and/or there is more divergence between sample and reference than what fast mappers will handle gracefully (say the reference genome is missing and a related species is used instead).

Other Packages Related to anfo

• dep: libanfo0

  Library for Short Read Aligner/Mapper from MPG

• dep: libbz2-1.0

  high-quality block-sorting file compressor library - runtime

• dep: libc6 (>= 2.27)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libelk0

  implementation of Scheme (the Extension Language Kit)

• dep: libgcc1 (>= 1:3.0) [amd64, arm64]

  GCC support library

  dep: libgcc1 (>= 1:3.5) [armhf]

  dep: libgcc1 (>= 1:4.2) [i386]

• dep: libpopt0 (>= 1.14)

  lib for parsing cmdline parameters

• dep: libprotobuf17

  protocol buffers C++ library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

Download anfo

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Architecture	Package Size	Installed Size	Files
amd64	115.6 kB	450.0 kB	[list of files]
arm64	107.7 kB	410.0 kB	[list of files]
armhf	104.5 kB	308.0 kB	[list of files]
i386	122.0 kB	428.0 kB	[list of files]