Package: mecat2 (0.0+git20200428.f54c542+ds-3)

[ Source: mecat2  ]

ultra-fast and accurate de novo assembly tools for SMRT reads

An improved version of MECAT. It is an ultra-fast and accurate mapping and error correcting de novo assembly tools for single molecula sequencing (SMRT) reads. MECAT2 consists of the following three modules:

 1. mecat2map: a fast and accurate alignment tool for SMRT reads.
 2. mecat2cns: correct noisy reads based on their pairwise overlaps.
 3. fsa: a string graph based assembly tool.

Other Packages Related to mecat2

• dep: libc6 (>= 2.29)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC support library

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 6)

  GNU Standard C++ Library v3

• dep: perl

  Larry Wall's Practical Extraction and Report Language

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

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Architecture	Package Size	Installed Size	Files
amd64	749.5 kB	4,053.0 kB	[list of files]