Package: r-cran-tfmpvalue (0.0.9-1)

[ Source: r-cran-tfmpvalue  ]

GNU R P-Value Computation for Position Weight Matrices

In putative Transcription Factor Binding Sites (TFBSs) identification from sequence/alignments, it is interesting to obtain the significance of certain match score. TFMPvalue provides the accurate calculation of P-value with score threshold for Position Weight Matrices, or the score with given P-value. This package is an interface to code originally made available by Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15.

Other Packages Related to r-cran-tfmpvalue

• dep: libc6 (>= 2.29)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0) [not armel, armhf]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: r-api-4.0

  virtual package provided by r-base-core

• dep: r-base-core (>= 4.2.2-1)

  GNU R core of statistical computation and graphics system

• dep: r-cran-rcpp (>= 0.11.1)

  GNU R package for Seamless R and C++ Integration

• sug: r-cran-testthat

  GNU R testsuite

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