Paket: python3-pbcommand (2.1.1+git20220616.3f2e6c2-3)

[ Quellcode: python-pbcommand  ]

common command-line interface for Pacific Biosciences analysis modules

To integrate with the pbsmrtpipe workflow engine, one must to be able to generate a Tool Contract and to be able to run from a Resolved Tool Contract. A Tool Contract contains the metadata of the exe, such as the file types of inputs, outputs and options. There are two principal use cases, first wrapping/calling Python functions that have been defined in external Python 3 packages, or scripts. Second, creating a CLI tool that supports emitting tool contracts, running resolved tool contracts and complete argparse-style CLI.

Andere Pakete mit Bezug zu python3-pbcommand

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-avro

  Apache Avro serialization system (Python 3 library)

• dep: python3-iso8601

  Python module to parse ISO 8601 dates - Python 3.x

• dep: python3-numpy

  Fast array facility to the Python language (Python 3)

• dep: python3-requests

  Elegante und einfache Python-3-HTTP-Bibliothek, für Menschen gebaut

• dep: python3-tz

  Python-3-Version der Olson-Zeitzonendatenbank

• rec: python3-pbcore

  Python 3 library for processing PacBio data files

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