Paket: r-bioc-rwikipathways (1.22.1+dfsg-1)

[ Quellcode: r-bioc-rwikipathways  ]

GNU R client library for the WikiPathways API

WikiPathways is a well-known repository for biological pathways that provides unique tools to the research community for content creation, editing and utilization.

The package rWikiPathways leverages the WikiPathways API to communicate between GNU R and WikiPathways, allowing any pathway to be queried, interrogated and downloaded in both data and image formats. Queries are typically performed based on "Xrefs", standardized identifiers for genes, proteins and metabolites. Once you can identified a pathway, you can use the WPID (WikiPathways identifier) to make additional queries.

Andere Pakete mit Bezug zu r-bioc-rwikipathways

• dep: r-api-4.0

  virtuelles Paket, bereitgestellt durch r-base-core

• dep: r-api-bioc-3.18

  virtuelles Paket, bereitgestellt durch r-bioc-biocgenerics

• dep: r-cran-data.table

  GNU R - Erweiterung von data.frame()

• dep: r-cran-dplyr

  GNU R grammar of data manipulation

• dep: r-cran-httr

  GNU R tools for working with URLs and HTTP

• dep: r-cran-lubridate

  simplifies dealing with dates in R

• dep: r-cran-purrr

  GNU R functional programming tools

• dep: r-cran-rcurl

  GNU R General network (HTTP/FTP/...) client interface

• dep: r-cran-readr

  GNU R package to read rectangular text data

• dep: r-cran-rjson

  GNU R package for converting between R and JSON objects

• dep: r-cran-stringr

  Erleichtert die Arbeit mit Strings

• dep: r-cran-tidyr

  GNU R package to easily tidy data

• dep: r-cran-xml

  GNU R package for XML parsing and generation

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rmarkdown

  Konvertierung von R-Markdown-Dokumenten in verschiedene Formate

• sug: r-cran-testthat

  GNU R testsuite

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