Package: python3-cyvcf2 (0.30.28-1 and others)

[ Source: cyvcf2  ]

VCF-fortolker baseret på htslib - Python 3

Dette modul tillader hurtig fortolkning af VCF og BCF inklusive regionsforespørgsler med Python. Dette er essentielt for effektiv analyse af nukleotid variation med Python på sekventeringsdata med høj-gennemløb.

Cyvcf2 er et cython-omslag omkring htslib. Attributter som variant.gt_ref_depths returnerer en numpy-tabel direkte, så de er direkte klar til brug.

Denne pakke installerer biblioteket for Python 3.

Other Packages Related to python3-cyvcf2

• dep: libc6 (>= 2.14) [amd64]

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  dep: libc6 (>= 2.16) [x32]

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.37) [sh4]

  dep: libc6 (>= 2.7) [not alpha, amd64, arm64, ia64, ppc64el, riscv64, sh4, x32]

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  dep: libc6.1 (>= 2.7) [alpha]

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• dep: libhts3t64 (>= 1.17) [not x32]

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• dep: python3

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  dep: python3 (<< 3.13) [not x32]

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• dep: python3-numpy-abi9

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Download python3-cyvcf2

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	0.30.28-1+b1	934.7 kB	5,724.0 kB	[list of files]
amd64	0.30.28-1+b1	983.3 kB	5,499.0 kB	[list of files]
arm64	0.30.28-1+b1	924.4 kB	5,461.0 kB	[list of files]
armel	0.30.28-1+b1	923.8 kB	5,333.0 kB	[list of files]
armhf	0.30.28-1+b1	934.2 kB	4,981.0 kB	[list of files]
hppa (unofficial port)	0.30.28-1+b1	939.7 kB	5,946.0 kB	[list of files]
i386	0.30.28-1+b1	986.4 kB	5,559.0 kB	[list of files]
ia64 (unofficial port)	0.30.28-1+b1	1,027.9 kB	6,797.0 kB	[list of files]
m68k (unofficial port)	0.30.28-1+b1	585.0 kB	4,329.0 kB	[list of files]
mips64el	0.30.28-1+b1	883.5 kB	5,557.0 kB	[list of files]
ppc64 (unofficial port)	0.30.28-1+b1	954.3 kB	5,909.0 kB	[list of files]
ppc64el	0.30.28-1+b1	962.8 kB	5,781.0 kB	[list of files]
riscv64	0.30.28-1+b1	978.0 kB	5,193.0 kB	[list of files]
s390x	0.30.28-1+b1	946.8 kB	5,501.0 kB	[list of files]
sh4 (unofficial port)	0.30.28-1+b1	732.4 kB	4,243.0 kB	[list of files]
sparc64 (unofficial port)	0.30.28-1+b1	885.5 kB	6,243.0 kB	[list of files]
x32 (unofficial port)	0.30.22-1	790.1 kB	4,649.0 kB	[list of files]