Package: r-bioc-variantannotation (1.48.1-1 and others)

[ Source: r-bioc-variantannotation  ]

BioConductor-annotation af genetiske varianter

Denne BioConductor-pakke tilbyder R-funktioner til at annotere varianter, beregne ændring af aminosyrekodning og forudsige kodningsresultater.

Other Packages Related to r-bioc-variantannotation

• dep: libbz2-1.0 [not hppa, m68k, sh4, sparc64, x32]

  højkvalitets bloksorteringsfilpakningsbibliotek - kørselstid

• dep: libc6 (>= 2.15) [m68k, sparc64]

  GNU C-bibliotek: Delte biblioteker
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.34) [not alpha, ia64, m68k, sh4, sparc64]

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C-bibliotek: Delte biblioteker
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libcurl4 (>= 7.18.0) [alpha, hppa, ia64, sh4, x32]

  nemt at bruge adresseoverførelsesbibliotek for klientsiden (OpenSSL-variant)

• dep: libcurl4t64 (>= 7.18.0) [amd64, arm64, mips64el, ppc64, ppc64el, riscv64, s390x]

  nemt at bruge adresseoverførelsesbibliotek for klientsiden (OpenSSL-variant)

• dep: liblzma5 (>= 5.1.1alpha+20120614) [not hppa, m68k, sh4, sparc64, x32]

  Kompressionsbibliotek for XZ-formatet

• dep: r-api-3.4 [m68k]

  Package not available

• dep: r-api-3.5 [sparc64]

  Package not available

• dep: r-api-4.0 [not m68k, sparc64]

  virtual package provided by r-base-core

• dep: r-api-bioc-3.16 [x32]

  Package not available

• dep: r-api-bioc-3.18 [not m68k, sparc64, x32]

  virtual package provided by r-bioc-biocgenerics

• dep: r-api-bioc-3.8 [sparc64]

  Package not available

• dep: r-base-core (>= 3.4.3-1) [m68k]

  GNU R-kerne af statistisk beregning og grafiksystem

  dep: r-base-core (>= 3.5.2-1) [sparc64]

  dep: r-base-core (>= 4.2.2.20221110-2) [x32]

• dep: r-bioc-annotationdbi (>= 1.27.9)

  GNU R Annotation Database-grænseflade for BioConductor

• dep: r-bioc-biobase

  Grundlæggende funktioner for Bioconductor

• dep: r-bioc-biocgenerics (>= 0.15.3) [m68k, sparc64]

  Generiske funktioner for Bioconductor

  dep: r-bioc-biocgenerics (>= 0.37.0) [not m68k, sparc64]

• dep: r-bioc-biostrings (>= 2.33.5) [m68k]

  GNU R-strengobjekter der repræsenterer biologiske sekvenser

  dep: r-bioc-biostrings (>= 2.47.6) [sparc64]

  dep: r-bioc-biostrings (>= 2.57.2) [not m68k, sparc64]

• dep: r-bioc-bsgenome (>= 1.37.6) [m68k]

  BioConductor-infrastruktur for Biostrings-baserede arvemassepakker

  dep: r-bioc-bsgenome (>= 1.47.3) [not m68k]

• dep: r-bioc-genomeinfodb (>= 1.11.4) [m68k]

  BioConductor-redskaber til at manipulere kromosomidentifikatorer

  dep: r-bioc-genomeinfodb (>= 1.15.2) [not m68k]

• dep: r-bioc-genomicfeatures (>= 1.27.4) [m68k]

  GNU R-værktøjer til at lave og manipulere transcript centric-annotationer

  dep: r-bioc-genomicfeatures (>= 1.31.3) [not m68k]

• dep: r-bioc-genomicranges (>= 1.27.6) [m68k]

  BioConductor-repræsentation og manipulation af genomiske intervaller

  dep: r-bioc-genomicranges (>= 1.31.8) [sparc64]

  dep: r-bioc-genomicranges (>= 1.41.5) [not m68k, sparc64]

• dep: r-bioc-iranges (>= 2.13.13) [sparc64]

  GNU R - containere på lavt niveau til at lagre sæt af heltalsintervaller

  dep: r-bioc-iranges (>= 2.23.9) [not m68k, sparc64]

  dep: r-bioc-iranges (>= 2.3.25) [m68k]

• dep: r-bioc-matrixgenerics [not m68k, sparc64]

  S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

• dep: r-bioc-rhtslib (>= 1.99.3) [not m68k, sparc64]

  HTSlib high-throughput sequencing library as GNU R package

• dep: r-bioc-rsamtools (>= 1.23.10) [m68k]

  GNU R-binær sammenligning (BAM), variantkald (BCF) eller tabix-filimport

  dep: r-bioc-rsamtools (>= 1.33.6) [sparc64]

  dep: r-bioc-rsamtools (>= 1.99.0) [not m68k, sparc64]

• dep: r-bioc-rtracklayer (>= 1.25.16) [m68k]

  GNU R-grænseflade til genombrowsere og deres annotationsspor

  dep: r-bioc-rtracklayer (>= 1.39.7) [not m68k]

• dep: r-bioc-s4vectors (>= 0.13.13) [m68k]

  BioConductor S4-implementering af vektorer og lister

  dep: r-bioc-s4vectors (>= 0.17.24) [sparc64]

  dep: r-bioc-s4vectors (>= 0.27.12) [not m68k, sparc64]

• dep: r-bioc-summarizedexperiment (>= 1.19.5) [not m68k, sparc64]

  BioConductor - assay-container

  dep: r-bioc-summarizedexperiment (>= 1.5.3) [m68k]

  dep: r-bioc-summarizedexperiment (>= 1.9.9) [sparc64]

• dep: r-bioc-xvector (>= 0.19.7) [sparc64]

  BioConductor-repræsentation og manipulering af eksterne sekvenser

  dep: r-bioc-xvector (>= 0.29.2) [not m68k, sparc64]

  dep: r-bioc-xvector (>= 0.5.6) [m68k]

• dep: r-bioc-zlibbioc [not m68k]

  (Virtuel) zlibbioc - Bioconductor-pakke

• dep: r-cran-dbi

  GNU R-pakke der tilbyder en generisk databasegrænseflade

• dep: zlib1g (>= 1:1.2.3.3) [not hppa, sh4, x32]

  Komprimeringsbibliotek - kørselstid

• rec: r-bioc-snpstats

  BioCondutor - SnpMatrix- og XSnpMatrix-klasser og metoder

• rec: r-cran-runit

  GNU R-pakke der tilbyder en ramme for enhedstest

• sug: r-bioc-annotationhub

  GNU R-klient til at tilgå AnnotationHub-ressourcer

• sug: r-bioc-biocstyle [not m68k, sparc64]

  Standardstile for vignettes og andre Biocunductor-dokumenter

• sug: r-bioc-snpstats [not sparc64]

  BioCondutor - SnpMatrix- og XSnpMatrix-klasser og metoder

• sug: r-cran-ggplot2

  Implementering af Grammar of Graphics

• sug: r-cran-knitr [not m68k, sparc64, x32]

  GNU R-pakke for dynamisk rapportoprettelse via Literate Programming

• sug: r-cran-runit [not sparc64]

  GNU R-pakke der tilbyder en ramme for enhedstest

Download r-bioc-variantannotation

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1.48.1-1+b1	3,427.5 kB	6,251.0 kB	[list of files]
amd64	1.48.1-1+b1	3,418.5 kB	6,117.0 kB	[list of files]
arm64	1.48.1-1+b1	3,392.7 kB	6,121.0 kB	[list of files]
hppa (unofficial port)	1.48.1-1	3,434.8 kB	6,221.0 kB	[list of files]
ia64 (unofficial port)	1.48.1-1+b1	3,527.1 kB	6,992.0 kB	[list of files]
m68k (unofficial port)	1.24.2-1	2,311.9 kB	2,941.0 kB	[list of files]
mips64el	1.48.1-1+b1	3,392.2 kB	6,223.0 kB	[list of files]
ppc64 (unofficial port)	1.48.1-1+b1	3,454.6 kB	6,512.0 kB	[list of files]
ppc64el	1.48.1-1+b1	3,450.4 kB	6,377.0 kB	[list of files]
riscv64	1.48.1-1+b2	3,435.8 kB	5,993.0 kB	[list of files]
s390x	1.48.1-1+b1	3,430.3 kB	6,217.0 kB	[list of files]
sh4 (unofficial port)	1.48.1-1	3,463.5 kB	5,991.0 kB	[list of files]
sparc64 (unofficial port)	1.28.10-1	2,919.0 kB	4,040.0 kB	[list of files]
x32 (unofficial port)	1.44.1-1	3,556.8 kB	5,071.0 kB	[list of files]