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[ Source: bedtools  ]

Package: bedtools (2.27.1+dfsg-4 and others)

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Programpakke med redskaber for sammenligning af arvemassefunktioner

BEDTools-redskaber giver mulighed for at adressere gængse arvemasseopgaver såsom at finde funktionsoverlap og beregne dækning. Redskaberne er hovedsagelig baseret på fire meget udbredte filformater: BED, GFF/GTF, VCF og SAM/BAM. Med brug af BEDTools kan du udvikle sofistikerede datakanaler, som besvarer komplicerede forskningsspørgsmål ved at udsende flere BEDTools sammen.

Redskabet groupBy er distribueret i pakken filo.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Suite, Purpose: use::analysing, use::comparing, Data Conversion, use::filtering, works-with::biological-sequence

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Download bedtools

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 2.27.1+dfsg-3 554.2 kB2,274.0 kB [list of files]
amd64 2.27.1+dfsg-4 579.5 kB1,955.0 kB [list of files]
arm64 2.27.1+dfsg-4 515.0 kB1,803.0 kB [list of files]
armel 2.27.1+dfsg-4 468.1 kB1,634.0 kB [list of files]
armhf 2.27.1+dfsg-4 497.1 kB1,190.0 kB [list of files]
hppa (unofficial port) 2.26.0+dfsg-3 624.5 kB2,371.0 kB [list of files]
hurd-i386 2.26.0+dfsg-5 597.9 kB1,979.0 kB [list of files]
i386 2.27.1+dfsg-4 634.7 kB2,186.0 kB [list of files]
kfreebsd-amd64 2.26.0+dfsg-5 569.8 kB1,948.0 kB [list of files]
kfreebsd-i386 2.26.0+dfsg-5 616.2 kB2,155.0 kB [list of files]
m68k (unofficial port) 2.27.1+dfsg-3 562.0 kB1,886.0 kB [list of files]
mips64el 2.27.1+dfsg-4 513.7 kB2,518.0 kB [list of files]
mipsel 2.27.1+dfsg-4 522.3 kB2,394.0 kB [list of files]
powerpcspe (unofficial port) 2.27.1+dfsg-3 529.0 kB1,959.0 kB [list of files]
ppc64 (unofficial port) 2.26.0+dfsg-5 563.4 kB2,404.0 kB [list of files]
ppc64el 2.27.1+dfsg-4 584.6 kB2,407.0 kB [list of files]
riscv64 (unofficial port) 2.27.1+dfsg-3 571.7 kB1,597.0 kB [list of files]
sh4 (unofficial port) 2.27.1+dfsg-3 678.7 kB1,739.0 kB [list of files]
sparc64 (unofficial port) 2.26.0+dfsg-5 460.9 kB1,898.0 kB [list of files]
x32 (unofficial port) 2.26.0+dfsg-5 555.3 kB1,727.0 kB [list of files]