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[ Source: velvet  ]

Package: velvet-long (1.2.10+dfsg1-5)

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Nucleic acid sequence assembler for very short reads, long version

Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.

Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs.

This package installs special long-mode versions of Velvet, as recommended in the Velvet tutorials.

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Download velvet-long

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 213.7 kB1,930.0 kB [list of files]
arm64 186.1 kB1,690.0 kB [list of files]
armel 226.3 kB2,232.0 kB [list of files]
armhf 200.5 kB1,344.0 kB [list of files]
i386 243.9 kB2,456.0 kB [list of files]
mips 226.9 kB2,628.0 kB [list of files]
mips64el 213.3 kB2,391.0 kB [list of files]
mipsel 232.1 kB2,640.0 kB [list of files]
ppc64el 206.1 kB2,634.0 kB [list of files]
s390x 209.2 kB2,074.0 kB [list of files]