Package: pbsim (1.0.3+git20180330.e014b1d+dfsg-1)

[ Source: pbsim  ]

simulator for PacBio sequencing reads

PacBio DNA sequencers produce two types of characteristic reads: CCS (short and low error rate) and CLR (long and high error rate), both of which could be useful for de novo assembly of genomes. PBSIM simulates those PacBio reads from a reference sequence by using either a model-based or sampling-based simulation. Simulated reads are useful, for example, when developing or evaluating sequence assemblers targeted at PacBio data.

Tags: Biology: Nucleic Acids, Field: Biology, field::biology:bioinformatics, implemented-in::c++, Role: Program, Purpose: use::simulating, works-with::biological-sequence

Other Packages Related to pbsim

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.4) [armhf, i386]

• dep: libgcc1 (>= 1:3.0) [amd64, arm64]

  GCC support library

  dep: libgcc1 (>= 1:3.5) [armhf]

  dep: libgcc1 (>= 1:7) [i386]

• dep: libstdc++6 (>= 4.1.1)

  GNU Standard C++ Library v3

Download pbsim

Download for all available architectures

Architecture	Package Size	Installed Size	Files
amd64	24.8 kB	97.0 kB	[list of files]
arm64	24.0 kB	93.0 kB	[list of files]
armhf	23.8 kB	84.0 kB	[list of files]
i386	25.7 kB	100.0 kB	[list of files]