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[ Source: kmer  ]

Package: meryl (0~20150903+r2013-6)

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in- and out-of-core kmer counting and utilities

meryl computes the kmer content of genomic sequences. Kmer content is represented as a list of kmers and the number of times each occurs in the input sequences. The kmer can be restricted to only the forward kmer, only the reverse kmer, or the canonical kmer (lexicographically smaller of the forward and reverse kmer at each location). Meryl can report the histogram of counts, the list of kmers and their counts, or can perform mathematical and set operations on the processed data files.

This package is part of the Kmer suite.

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Architecture Package Size Installed Size Files
amd64 193.8 kB1,471.0 kB [list of files]
arm64 190.2 kB1,319.0 kB [list of files]
armel 205.4 kB1,563.0 kB [list of files]
armhf 215.7 kB1,339.0 kB [list of files]
i386 235.0 kB1,867.0 kB [list of files]
mips 259.2 kB1,905.0 kB [list of files]
mips64el 211.6 kB1,621.0 kB [list of files]
mipsel 264.8 kB1,905.0 kB [list of files]
ppc64el 224.1 kB1,827.0 kB [list of files]
s390x 176.7 kB1,491.0 kB [list of files]