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[ Source: embassy-domainatrix  ]

Package: embassy-domainatrix (0.1.660-3)

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Extra EMBOSS commands to handle domain classification file

The DOMAINATRIX programs were developed by Jon Ison and colleagues at MRC HGMP for their protein domain research. They are included as an EMBASSY package as a work in progress.

Applications in the current domainatrix release are cathparse (generates DCF file from raw CATH files), domainnr (removes redundant domains from a DCF file), domainreso (removes low resolution domains from a DCF file), domainseqs (adds sequence records to a DCF file), domainsse (adds secondary structure records to a DCF file), scopparse (generates DCF file from raw SCOP files) and ssematch (searches a DCF file for secondary structure matches).

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Application Suite: suite::TODO, use::analysing, Purpose: Data Conversion, Editing, use::searching, works-with-format::TODO, Supports Format: Plain Text, Works with: Need an extra tag

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Architecture Package Size Installed Size Files
amd64 61.4 kB504.0 kB [list of files]
arm64 60.4 kB472.0 kB [list of files]
armel 59.9 kB456.0 kB [list of files]
armhf 59.3 kB448.0 kB [list of files]
i386 61.2 kB496.0 kB [list of files]
mips 59.9 kB463.0 kB [list of files]
mips64el 60.7 kB476.0 kB [list of files]
mipsel 60.3 kB463.0 kB [list of files]
ppc64el 62.4 kB851.0 kB [list of files]
s390x 60.5 kB476.0 kB [list of files]