Package: deepnano (0.0+git20170813.e8a621e-3)

[ Source: deepnano  ]

alternative basecaller for MinION reads of genomic sequences

DeepNano is alternative basecaller for Oxford Nanopore MinION reads based on deep recurrent neural networks.

Currently it works with SQK-MAP-006 and SQK-MAP-005 chemistry and as a postprocessor for Metrichor.

Other Packages Related to deepnano

• dep: deepnano-data

  alternative basecaller for MinION reads of genomic sequences (data)

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.4) [i386]

• dep: libgcc1 (>= 1:3.0)

  GCC support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: python

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• dep: python-dateutil

  powerful extensions to the standard Python datetime module

• dep: python-h5py

  general-purpose Python interface to hdf5 (Python 2)

• dep: python-numpy

  Numerical Python adds a fast array facility to the Python language

• dep: python-theano

  CPU/GPU math expression compiler for Python

• rec: python-watchdog

  Python API and shell utilities to monitor file system events - Python 2.x

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Architecture	Package Size	Installed Size	Files
amd64	19.9 kB	97.0 kB	[list of files]
arm64	19.4 kB	89.0 kB	[list of files]
i386	20.5 kB	95.0 kB	[list of files]