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[ Source: ncbi-seg  ]

Package: ncbi-seg (0.0.20000620-6)

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tool to mask segments of low compositional complexity in amino acid sequences

ncbi-seg (a.k.a. SEG) is a program for identifying and masking segments of low compositional complexity in amino acid sequences.

ncbi-seg divides sequences into contrasting segments of low-complexity and high-complexity. Low-complexity segments defined by the algorithm represent "simple sequences" or "compositionally-biased regions".

This program is inappropriate for masking nucleotide sequences and, in fact, may strip some nucleotide ambiguity codes from nt. sequences as they are being read.

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Download for all available architectures
Architecture Package Size Installed Size Files
amd64 82.7 kB142.0 kB [list of files]
arm64 82.0 kB138.0 kB [list of files]
armel 82.2 kB137.0 kB [list of files]
armhf 80.6 kB129.0 kB [list of files]
i386 83.4 kB145.0 kB [list of files]
mips64el 83.0 kB149.0 kB [list of files]
mipsel 82.7 kB140.0 kB [list of files]
ppc64el 84.3 kB178.0 kB [list of files]
s390x 82.1 kB142.0 kB [list of files]