Package: perm (0.4.0-7)

[ Source: perm  ]

efficient mapping of short reads with periodic spaced seeds

PerM is a software package which was designed to perform highly efficient genome scale alignments for hundreds of millions of short reads produced by the ABI SOLiD and Illumina sequencing platforms. Today PerM is capable of providing full sensitivity for alignments within 4 mismatches for 50bp SOLID reads and 9 mismatches for 100bp Illumina reads.

Other Packages Related to perm

• dep: libbsd0 (>= 0.0)

  utility functions from BSD systems - shared library

• dep: libc6 (>= 2.29)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0) [arm64, ppc64el, s390x]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [amd64, i386, mips64el, mipsel]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

Download perm

Download for all available architectures

Architecture	Package Size	Installed Size	Files
amd64	126.1 kB	348.0 kB	[list of files]
arm64	113.0 kB	316.0 kB	[list of files]
armel	108.4 kB	299.0 kB	[list of files]
armhf	112.7 kB	227.0 kB	[list of files]
i386	141.7 kB	399.0 kB	[list of files]
mips64el	128.7 kB	481.0 kB	[list of files]
mipsel	133.3 kB	445.0 kB	[list of files]
ppc64el	130.3 kB	412.0 kB	[list of files]
s390x	114.0 kB	352.0 kB	[list of files]