Package: minimap (0.2-5)

[ Source: minimap  ]

tool for approximate mapping of long biosequences such as DNA reads

Minimap is an experimental tool to efficiently find multiple approximate mapping positions between two sets of long biological sequences, such as between DNA reads and reference genomes, between genomes and between long noisy reads. Minimap does not generate alignments as of now and because of this, it is usually tens of times faster than mainstream aligners. It does not replace mainstream aligners, but it can be useful when you want to quickly identify long approximate matches at moderate divergence among a huge collection of sequences. For this task, it is much faster than most existing tools.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: scope::utility, use::calculating, Works with: Biological Sequence

Other Packages Related to minimap

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [not amd64, arm64, ppc64el]

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

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Architecture	Package Size	Installed Size	Files
amd64	26.4 kB	67.0 kB	[list of files]
arm64	24.8 kB	63.0 kB	[list of files]
armel	26.6 kB	66.0 kB	[list of files]
armhf	24.2 kB	50.0 kB	[list of files]
i386	29.1 kB	70.0 kB	[list of files]
mips64el	26.6 kB	70.0 kB	[list of files]
mipsel	27.4 kB	68.0 kB	[list of files]
ppc64el	28.3 kB	83.0 kB	[list of files]
s390x	25.6 kB	67.0 kB	[list of files]