Package: hilive (2.0a-3 and others)

[ Source: hilive  ]

realtime alignment of Illumina reads

HiLive is a read mapping tool that maps Illumina HiSeq (or comparable) reads to a reference genome right in the moment when they are produced. This means, read mapping is finished as soon as the sequencer is finished generating the data.

Other Packages Related to hilive

• dep: libboost-filesystem1.74.0 (>= 1.74.0)

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-program-options1.74.0 (>= 1.74.0)

  program options library for C++

• dep: libc6 (>= 2.27)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0) [arm64, ppc64el, s390x]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [amd64, mips64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386, mipsel]

• dep: liblz4-1 (>= 0.0~r113)

  Fast LZ compression algorithm library - runtime

• dep: libstdc++6 (>= 10.2) [armel]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 9) [not armel]

• dep: zlib1g (>= 1:1.2.3.3)

  compression library - runtime

Download hilive

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
amd64	2.0a-3+b2	528.6 kB	2,391.0 kB	[list of files]
arm64	2.0a-3+b2	462.8 kB	2,215.0 kB	[list of files]
armel	2.0a-3+b2	434.8 kB	2,085.0 kB	[list of files]
armhf	2.0a-3+b2	452.0 kB	1,481.0 kB	[list of files]
i386	2.0a-3+b2	533.5 kB	2,537.0 kB	[list of files]
mips64el	2.0a-3+b2	480.2 kB	3,323.0 kB	[list of files]
mipsel	2.0a-3+b2	490.0 kB	3,209.0 kB	[list of files]
ppc64el	2.0a-3+b2	506.8 kB	2,883.0 kB	[list of files]
s390x	2.0a-3+b2	455.9 kB	2,411.0 kB	[list of files]