Package: snap-aligner (2.0.2+dfsg-1)

[ Source: snap-aligner  ]

Scalable Nucleotide Alignment Program

SNAP is a new sequence aligner that is 3-20x faster and just as accurate as existing tools like BWA-mem, Bowtie2 and Novoalign. It runs on commodity x86 processors, and supports a rich error model that lets it cheaply match reads with more differences from the reference than other tools. This gives SNAP up to 2x lower error rates than existing tools (in some cases) and lets it match larger mutations that they may miss. SNAP also natively reads BAM, FASTQ, or gzipped FASTQ, and natively writes SAM or BAM, with built-in sorting, duplicate marking, and BAM indexing.

Other Packages Related to snap-aligner

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 4.0)

  GCC support library

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: zlib1g (>= 1:1.2.3.4)

  compression library - runtime

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arm64	783.2 kB	1,948.0 kB	[list of files]
mips64el	810.7 kB	2,416.0 kB	[list of files]
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