all options
bookworm  ] [  sid  ]
[ Source: abpoa  ]

Package: python3-pyabpoa (1.4.1-3 and others)

Links for python3-pyabpoa


Debian Resources:

Download Source Package abpoa:


External Resources:

Similar packages:

adaptive banded Partial Order Alignment - python3 module

abPOA is an extended version of Partial Order Alignment (POA) that performs adaptive banded dynamic programming (DP) with an SIMD implementation. abPOA can perform multiple sequence alignment (MSA) on a set of input sequences and generate a consensus sequence by applying the heaviest bundling algorithm to the final alignment graph.

abPOA can generate high-quality consensus sequences from error-prone long reads and offer significant speed improvement over existing tools.

abPOA supports three alignment modes (global, local, extension) and flexible scoring schemes that allow linear, affine and convex gap penalties. It right now supports SSE2/SSE4.1/AVX2 vectorization.

This package provides the python3 module of abPOA.

Other Packages Related to python3-pyabpoa

  • depends
  • recommends
  • suggests
  • enhances

Download python3-pyabpoa

Download for all available architectures
Architecture Version Package Size Installed Size Files
amd64 1.4.1-3+b1 175.2 kB737.0 kB [list of files]
arm64 1.4.1-3+b1 146.5 kB679.0 kB [list of files]
ppc64el 1.4.1-3+b1 174.8 kB935.0 kB [list of files]