Пакет: murasaki (1.68.6-13 и други) [debports]

[ Източник:  ]

homology detection tool across multiple large genomes

Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.

Murasaki is an anchor alignment software, which is

 * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
   40 nodes: 52 wall minutes))
 * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
   Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
 * unlimited pattern length
 * repeat tolerant
 * intelligent noise reduction

Други пакети, свързани с murasaki

• dep: libboost-filesystem1.83.0 (>= 1.83.0)

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-iostreams1.83.0 (>= 1.83.0)

  Boost.Iostreams Library

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  също и виртуален пакет, предлаган от libc6-udeb

• dep: libgcc-s4 (>= 4.1.1)

  GCC support library

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: murasaki-common

  homology detection tool across multiple large genomes (common files)

Изтегляне на murasaki

Изтегляне за всички налични архитектури

Архитектура	Версия	Големина на пакета	Големина след инсталиране	Файлове
hppa (неофициална архитектура)	1.68.6-13+b5	585,9 кБ	4 020,0 кБ	[списък на файловете]