Пакет: edlib-aligner (1.2.7-5) [debports]
Връзки за edlib-aligner
Ресурси за Debian:
Изтегляне на пакет-източник .
Няма съвпаденияОтговорници:
Външни препратки:
- Начална страница [github.com]
Подобни пакети:
edlib sequence alignment tool using edit distance
Edlib is a lightweight and super fast C/C++ library for sequence alignment using edit distance. This package provides an aligner using this library.
Features of libedlib
* Calculates edit distance (Levehnstein distance). * It can find optimal alignment path (instructions how to transform first sequence into the second sequence). * It can find just the start and/or end locations of alignment path - can be useful when speed is more important than having exact alignment path. * Supports multiple alignment methods: global(NW), prefix(SHW) and infix(HW), each of them useful for different scenarios. * You can extend character equality definition, enabling you to e.g. have wildcard characters, to have case insensitive alignment or to work with degenerate nucleotides. * It can easily handle small or very large sequences, even when finding alignment path, while consuming very little memory. * Super fast thanks to Myers's bit-vector algorithm.
Други пакети, свързани с edlib-aligner
|
|
|
|
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
също и виртуален пакет, предлаган от libc6-udeb
-
- dep: libedlib1 (= 1.2.7-5)
- library for sequence alignment using edit distance
-
- dep: libgcc-s4 (>= 4.1.1)
- GCC support library
-
- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
Изтегляне на edlib-aligner
Архитектура | Големина на пакета | Големина след инсталиране | Файлове |
---|---|---|---|
hppa (неофициална архитектура) | 22,6 кБ | 58,0 кБ | [списък на файловете] |