Пакет: tree-puzzle (5.2-11)

[ Източник: tree-puzzle  ]

Reconstruction of phylogenetic trees by maximum likelihood

TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that implements a fast tree search algorithm, quartet puzzling, that allows analysis of large data sets and automatically assigns estimations of support to each internal branch. TREE-PUZZLE also computes pairwise maximum likelihood distances as well as branch lengths for user specified trees. Branch lengths can also be calculated under the clock-assumption. In addition, TREE-PUZZLE offers a novel method, likelihood mapping, to investigate the support of a hypothesized internal branch without computing an overall tree and to visualize the phylogenetic content of a sequence alignment.

Етикети: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::comparing, Supports Format: Plain Text, Works with: Need an extra tag

Други пакети, свързани с tree-puzzle

• dep: libc6 (>= 2.17) [arm64]

  GNU C Library: Shared libraries
  също и виртуален пакет, предлаган от libc6-udeb

  dep: libc6 (>= 2.7) [не arm64]

• dep: libsprng2

  SPRNG Scalable Parallel RNG library -- library package

• rec: tree-puzzle-doc

  Reconstruction of phylogenetic trees by maximum likelihood (doc)

• sug: phylip

  package of programs for inferring phylogenies

• sug: treetool

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Архитектура	Големина на пакета	Големина след инсталиране	Файлове
amd64	132,9 кБ	313,0 кБ	[списък на файловете]
arm64	127,1 кБ	317,0 кБ	[списък на файловете]
armhf	121,2 кБ	241,0 кБ	[списък на файловете]
i386	134,3 кБ	333,0 кБ	[списък на файловете]