Пакет: ampliconnoise (1.29-8)

[ Източник: ampliconnoise  ]

removal of noise from 454 sequenced PCR amplicons

AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:

Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences

Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.

Етикети: Role: Program

Други пакети, свързани с ampliconnoise

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  също и виртуален пакет, предлаган от libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.4) [armhf, i386]

• dep: libgsl23 (>= 2.5)

  GNU Scientific Library (GSL) -- library package

• dep: libgslcblas0 (>= 2.4)

  GNU Scientific Library (GSL) -- blas library package

• dep: libopenmpi3

  high performance message passing library -- shared library

• dep: mafft

  Multiple alignment program for amino acid or nucleotide sequences

• rec: openmpi-bin

  high performance message passing library -- binaries

Изтегляне на ampliconnoise

Изтегляне за всички налични архитектури

Архитектура	Големина на пакета	Големина след инсталиране	Файлове
amd64	464,6 кБ	1 427,0 кБ	[списък на файловете]
arm64	456,5 кБ	1 365,0 кБ	[списък на файловете]
armhf	446,3 кБ	1 214,0 кБ	[списък на файловете]
i386	463,8 кБ	1 402,0 кБ	[списък на файловете]