Пакет: sra-toolkit (2.10.9+dfsg-2)
Връзки за sra-toolkit
Ресурси за Debian:
- Доклади за грешки
- Developer Information
- Журнал на промените в Debian
- Авторски права
- Управление на кръпките в Debian
Изтегляне на пакет-източник sra-sdk.
Отговорници:
- Debian Med Packaging Team (Страница за QA, Пощенски архив)
- Charles Plessy (Страница за QA)
- Andreas Tille (Страница за QA)
- Aaron M. Ucko (Страница за QA)
Външни препратки:
- Начална страница [github.com]
Подобни пакети:
utilities for the NCBI Sequence Read Archive
Tools for reading the SRA archive, generally by converting individual runs into some commonly used format such as fastq.
The textual dumpers "sra-dump" and "vdb-dump" are provided in this release as an aid in visual inspection. It is likely that their actual output formatting will be changed in the near future to a stricter, more formalized representation[s]. PLEASE DO NOT RELY UPON THE OUTPUT FORMAT SEEN IN THIS RELEASE.
Other tools distributed in this package are:
abi-dump, abi-load align-info bam-load cache-mgr cg-load copycat fasterq-dump fastq-dump, fastq-load helicos-load illumina-dump, illumina-load kar kdbmeta latf-load pacbio-load prefetch rcexplain remote-fuser sff-dump, sff-load sra-pileup, sra-sort, sra-stat, srapath srf-load test-sra vdb-config, vdb-copy, vdb-decrypt, vdb-encrypt, vdb-get, vdb-lock, vdb-passwd, vdb-unlock, vdb-validate
The "help" information will be improved in near future releases, and the tool options will become standardized across the set. More documentation will also be provided documentation on the NCBI web site.
Tool options may change in the next release. Version 1 tool options will remain supported wherever possible in order to preserve operation of any existing scripts.
Други пакети, свързани с sra-toolkit
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- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
също и виртуален пакет, предлаган от libc6-udeb
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- dep: libfuse2 (>= 2.6)
- Filesystem in Userspace (library)
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- dep: libkdf5-2 (>= 2.10.9+dfsg)
- hdf5 access to data in the INSDC Sequence Read Archives
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- dep: libmagic1 (>= 5.12)
- Recognize the type of data in a file using "magic" numbers - library
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- dep: libncbi-vdb2 (>= 2.10.9+dfsg)
- libraries for using data in the INSDC Sequence Read Archives
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- dep: libncbi-wvdb2 (>= 2.10.9+dfsg)
- virtual layer update modul of ncbi-vdb library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: libxml2 (>= 2.7.4)
- GNOME XML library
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- dep: zlib1g (>= 1:1.2.2)
- compression library - runtime
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- rec: med-config (>= 2.1)
- Debian Med general config package
Изтегляне на sra-toolkit
| Архитектура | Големина на пакета | Големина след инсталиране | Файлове |
|---|---|---|---|
| amd64 | 5 056,6 кБ | 10 056,0 кБ | [списък на файловете] |