Пакет: libjellyfish-2.0-dev (2.3.0-15 и други)

[ Източник: jellyfish  ]

count k-mers in DNA sequences (development files of jellyfish)

JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.

JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.

This package contains the development files (static library and header files)

Етикети: Software Development: Библиотеки, Role: Development Library

Други пакети, свързани с libjellyfish-2.0-dev

• dep: libjellyfish-2.0-2 (= 2.3.0-15+b3)

  count k-mers in DNA sequences (dynamic library of jellyfish)

Изтегляне на libjellyfish-2.0-dev

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Архитектура	Версия	Големина на пакета	Големина след инсталиране	Файлове
amd64	2.3.0-15+b3	132,4 кБ	687,0 кБ	[списък на файловете]
arm64	2.3.0-15+b3	130,1 кБ	682,0 кБ	[списък на файловете]
armel	2.3.0-15+b3	127,0 кБ	612,0 кБ	[списък на файловете]
armhf	2.3.0-15+b3	127,3 кБ	582,0 кБ	[списък на файловете]
i386	2.3.0-15+b3	139,8 кБ	632,0 кБ	[списък на файловете]
mips64el	2.3.0-15+b3	139,7 кБ	783,0 кБ	[списък на файловете]
ppc64el	2.3.0-15+b3	140,0 кБ	731,0 кБ	[списък на файловете]