Пакет: r-bioc-grohmm (1.32.0-1)

[ Източник: r-bioc-grohmm  ]

GRO-seq Analysis Pipeline

This BioConductor package provides a pipeline for the analysis of GRO- seq data. Among the more advanced features, r-bioc-grohmm predicts the boundaries of transcriptional activity across the genome de novo using a two-state hidden Markov model (HMM).

The used model essentially divides the genome into transcribed and non- transcribed regions in a strand specific manner. HMMs are used to identify the leading edge of Pol II at genes activated by a stimulus in GRO-seq time course data. This approach allows the genome-wide interrogation of transcription rates in cells.

Други пакети, свързани с r-bioc-grohmm

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  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [не amd64, arm64, ppc64el]

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Архитектура	Големина на пакета	Големина след инсталиране	Файлове
amd64	4 333,2 кБ	4 503,0 кБ	[списък на файловете]
arm64	4 331,0 кБ	4 511,0 кБ	[списък на файловете]
armel	4 331,6 кБ	4 510,0 кБ	[списък на файловете]
armhf	4 328,5 кБ	4 510,0 кБ	[списък на файловете]
i386	4 334,0 кБ	4 502,0 кБ	[списък на файловете]
mips64el	4 330,4 кБ	4 514,0 кБ	[списък на файловете]
mipsel	4 331,4 кБ	4 513,0 кБ	[списък на файловете]
ppc64el	4 336,3 кБ	4 511,0 кБ	[списък на файловете]
s390x	4 331,4 кБ	4 499,0 кБ	[списък на файловете]