Package: cd-hit (4.6-2012-04-25-1)

[ Source: cd-hit  ]

suite of programs designed to quickly group sequences

cd-hit contains a number of programs designed to quickly group sequences. cd-hit groups proteins into clusters that meet a user-defined similarity threshold. cd-hit-est is similar to cd-hit, but designed to group nucleotide sequences (without introns). cd-hit-est-2d is similar to cd-hit-2d but designed to compare two nucleotide datasets. A number of other related programs are also in this package. Please see the cd-hit user manual, also part of this package, for further information.

Other Packages Related to cd-hit

• dep: libc6 (>= 2.4)

  Embedded GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc1 (>= 1:4.4.0)

  GCC 支援函式庫

• dep: libgomp1 (>= 4.2.1)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 4.4.0)

  GNU Standard C++ Library v3

• dep: mpi-default-bin

  Standard MPI runtime programs (metapackage)

• dep: perl

  Larry Wall 的實用萃取與報告語言(PERL)

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Architecture	Package Size	Installed Size	Files
armel	685.5 kB	1,227.0 kB	[list of files]