套件：dnaclust（3-7 以及其他的）

[ 原始碼： dnaclust  ]

tool for clustering millions of short DNA sequences

dnaclust is a tool for clustering large number of short DNA sequences. The clusters are created in such a way that the "radius" of each clusters is no more than the specified threshold.

The input sequences to be clustered should be in Fasta format. The id of each sequence is based on the first word of the seqeunce in the Fasta format. The first word is the prefix of the header up to the first occurrence of white space characters in the header.

標籤: 生物學: Fasta/Pearson, 核酸, 領域: field::biology, field::biology:bioinformatics, 實做語言: C++, 角色: role::program, works-with::biological-sequence

其他與 dnaclust 有關的套件

• dep: libboost-program-options1.74.0 (>= 1.74.0)

  program options library for C++

• dep: libc6 (>= 2.29)

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: libgcc-s1 (>= 3.0) [除 armel, armhf]

  GCC 支援函式庫

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

下載 dnaclust

下載可用於所有硬體架構的

硬體架構	版本	套件大小	安裝後大小	檔案
amd64	3-7+b2	109。5 kB	677。0 kB	[檔案列表]
arm64	3-7+b2	101。6 kB	657。0 kB	[檔案列表]
armel	3-7+b2	98。4 kB	630。0 kB	[檔案列表]
armhf	3-7+b2	99。1 kB	574。0 kB	[檔案列表]
i386	3-7+b2	113。8 kB	674。0 kB	[檔案列表]
mips64el	3-7+b2	110。5 kB	748。0 kB	[檔案列表]
mipsel	3-7+b2	110。0 kB	723。0 kB	[檔案列表]
ppc64el	3-7+b2	113。4 kB	861。0 kB	[檔案列表]
s390x	3-7+b2	105。8 kB	689。0 kB	[檔案列表]