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[ 源代码: beagle  ]

软件包:beagle(220722-1)

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Genotype calling, genotype phasing and imputation of ungenotyped markers

Beagle performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-descent segment detection. Genotypic imputation works on phased haplotypes using a Li and Stephens haplotype frequency model. Beagle also implements the Refined IBD algorithm for detecting homozygosity-by-descent (HBD) and identity-by-descent (IBD) segments.

标签: 领域: 生物学, 生物信息学, 实做语言: implemented-in::java, interface::commandline, 角色: 程序, Purpose: Analysing

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