软件包：r-bioc-dropletutils（1.22.0+ds-1 以及其他的）

[ 源代码： r-bioc-dropletutils  ]

BioConductor utilities for handling single-cell droplet data

Provides a number of utility functions for handling single-cell (RNA-seq) data from droplet technologies such as 10X Genomics. This includes data loading from count matrices or molecule information files, identification of cells from empty droplets, removal of barcode-swapped pseudo-cells, and downsampling of the count matrix.

其他与 r-bioc-dropletutils 有关的软件包

• dep: libc6 (>= 2.29)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libgcc-s1 (>= 3.0) [除 armel, armhf]

  GCC 支持库

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libhdf5-103-1t64

  HDF5 C runtime files - serial version

• dep: libhdf5-cpp-103-1t64 (>= 1.10.5)

  HDF5 - C++ runtime files - serial version

• dep: libstdc++6 (>= 13.1)

  GNU 标准 C++ 库，第3版

• dep: r-api-4.0

  本虚包由这些包填实： r-base-core

• dep: r-api-bioc-3.18

  本虚包由这些包填实： r-bioc-biocgenerics

• dep: r-bioc-beachmat

  I/O for several formats storing matrix data

• dep: r-bioc-biocgenerics

  generic functions for Bioconductor

• dep: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• dep: r-bioc-delayedarray

  BioConductor delayed operations on array-like objects

• dep: r-bioc-delayedmatrixstats

  Functions on Rows and Columns of 'DelayedMatrix' Objects

• dep: r-bioc-edger

  Empirical analysis of digital gene expression data in R

• dep: r-bioc-genomicranges

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-hdf5array

  HDF5 backend for DelayedArray objects

• dep: r-bioc-iranges

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-rhdf5

  BioConductor HDF5 interface to R

• dep: r-bioc-rhdf5lib

  GNU R hdf5 library

• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-scuttle

  BioConductor single-cell RNA-Seq analysis utilities

• dep: r-bioc-singlecellexperiment

  S4 Classes for Single Cell Data

• dep: r-bioc-summarizedexperiment

  BioConductor assay container

• dep: r-cran-bh

  (Virtual) GNU R package to provide BH

• dep: r-cran-dqrng

  GNU R fast pseudo random number generators

• dep: r-cran-matrix

  GNU R package of classes for dense and sparse matrices

• dep: r-cran-r.utils

  GNU R various programming utilities

• dep: r-cran-rcpp

  GNU R package for Seamless R and C++ Integration

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-cran-jsonlite

  Robust, High Performance JSON Parser and Generator for R

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-testthat

  GNU R testsuite

下载 r-bioc-dropletutils

下载可用于所有硬件架构的

硬件架构	版本	软件包大小	安装后大小	文件
amd64	1.22.0+ds-1+b1	388.1 kB	730.0 kB	[文件列表]
arm64	1.22.0+ds-1+b1	371.3 kB	762.0 kB	[文件列表]
armel	1.22.0+ds-1+b1	369.3 kB	689.0 kB	[文件列表]
armhf	1.22.0+ds-1+b1	371.6 kB	616.0 kB	[文件列表]
i386	1.22.0+ds-1+b1	392.3 kB	744.0 kB	[文件列表]
mips64el	1.22.0+ds-1+b1	368.5 kB	850.0 kB	[文件列表]
ppc64el	1.22.0+ds-1+b1	387.5 kB	826.0 kB	[文件列表]
s390x	1.22.0+ds-1+b1	388.4 kB	762.0 kB	[文件列表]