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[ 源代码: embassy-domainatrix  ]

软件包: embassy-domainatrix (0.1.0-1)

Extra EMBOSS commands to handle domain classification file

The DOMAINATRIX programs were developed by Jon Ison and colleagues at MRC HGMP for their protein domain research. They are included as an EMBASSY package as a work in progress.

Applications in the current domainatrix release are cathparse (generates DCF file from raw CATH files), domainnr (removes redundant domains from a DCF file), domainreso (removes low resolution domains from a DCF file), domainseqs (adds sequence records to a DCF file), domainsse (adds secondary structure records to a DCF file), scopparse (generates DCF file from raw SCOP files) and ssematch (searches a DCF file for secondary structure matches).

其它与 embassy-domainatrix 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: emboss-lib
    EMBOSS Libraries
  • dep: libajax5
    EMBOSS library for commands
  • dep: libc0.1 (>= 2.7-1) [kfreebsd-amd64, kfreebsd-i386]
    GNU C 语言运行库：共享库
    同时作为一个虚包由这些包填实: libc0.1-udeb
  • dep: libc6 (>= 2.5-5) [m68k]
    GNU C 语言运行库：共享库
    同时作为一个虚包由这些包填实: libc6-udeb
    dep: libc6 (>= 2.7-1) [除 alpha, ia64, kfreebsd-amd64, kfreebsd-i386, m68k]
  • dep: libc6.1 (>= 2.7-1) [alpha, ia64]
    GNU C 语言运行库：共享库
    同时作为一个虚包由这些包填实: libc6.1-udeb
  • dep: libfontconfig1 (>= 2.4.0)
    generic font configuration library - runtime
  • dep: libfreetype6 (>= 2.3.5)
    FreeType 2 font engine, shared library files
  • dep: libgd2-xpm (>= 2.0.35.dfsg) [sparc]
    GD Graphics Library version 2
    dep: libgd2-xpm (>= 2.0.36~rc1~dfsg) [除 sparc]
  • dep: libjpeg62
    The Independent JPEG Group's JPEG runtime library
  • dep: libnucleus5
    EMBOSS library for molecular sequence analysis
  • dep: libpng12-0 (>= 1.2.13-4)
    PNG library - runtime
  • dep: libx11-6
    X11 client-side library
  • dep: libxpm4
    X11 pixmap library
  • dep: zlib1g [除 m68k, sparc]
    压缩库－运行时
    dep: zlib1g (>= 1:1.1.4) [m68k]
    dep: zlib1g (>= 1:1.2.3.3.dfsg-1) [sparc]
  • rec: emboss
    The European Molecular Biology Open Software Suite
  • sug: embassy
    软件包暂时不可用

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硬件架构 软件包大小 安装后大小 文件
alpha 76.5 kB536 kB [文件列表]
amd64 76.3 kB528 kB [文件列表]
arm 76.8 kB508 kB [文件列表]
armel 77.7 kB508 kB [文件列表]
hppa 80.7 kB508 kB [文件列表]
i386 80.5 kB504 kB [文件列表]
ia64 86.1 kB564 kB [文件列表]
kfreebsd-amd64 (非官方移植版) 79.3 kB448 kB [文件列表]
kfreebsd-i386 (非官方移植版) 78.0 kB430 kB [文件列表]
m68k 77.6 kB504 kB [文件列表]
mips 77.7 kB512 kB [文件列表]
mipsel 77.3 kB512 kB [文件列表]
powerpc 90.4 kB548 kB [文件列表]
s390 80.2 kB508 kB [文件列表]
sparc 78.2 kB508 kB [文件列表]