下载源码包 exonerate:
Exonerate allows you to align sequences using a many alignment models, using either exhaustive dynamic programming, or a variety of heuristics. Much of the functionality of the Wise dynamic programming suite was reimplemented in C for better efficiency. Exonerate is an intrinsic component of the building of the Ensembl genome databases, providing similarity scores between RNA and DNA sequences and thus determining splice variants and coding sequences in general.
An In-silico PCR Experiment Simulation System (see the ipcress man page) is packaged with exonerate.
This package also comes with a selection of utilities for performing simple manipulations quickly on fasta files beyond 2Gb
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| 硬件架构 | 版本 | 软件包大小 | 安装后大小 | 文件 |
|---|---|---|---|---|
| alpha | 2.0.0-1 | 3,393.7 kB | 9736 kB | [文件列表] |
| amd64 | 2.0.0-1 | 3,250.0 kB | 9172 kB | [文件列表] |
| arm | 2.0.0-1 | 3,363.0 kB | 9004 kB | [文件列表] |
| armel | 2.0.0-1 | 3,516.6 kB | 9268 kB | [文件列表] |
| hppa | 2.0.0-1 | 3,301.5 kB | 8692 kB | [文件列表] |
| hurd-i386 | 2.0.0-1 | 2,888.9 kB | 8832 kB | [文件列表] |
| i386 | 2.0.0-1 | 3,086.5 kB | 8656 kB | [文件列表] |
| ia64 | 2.0.0-1 | 4,917.0 kB | 21040 kB | [文件列表] |
| kfreebsd-amd64 (非官方移植版) | 2.0.0-1 | 3,249.3 kB | 9028 kB | [文件列表] |
| kfreebsd-i386 (非官方移植版) | 2.0.0-1 | 2,890.9 kB | 8682 kB | [文件列表] |
| m68k | 1.4.0-1 | 1,948.1 kB | 6448 kB | [文件列表] |
| mips | 2.0.0-1 | 3,452.4 kB | 10828 kB | [文件列表] |
| mipsel | 2.0.0-1 | 3,452.6 kB | 10828 kB | [文件列表] |
| powerpc | 2.0.0-1 | 3,123.8 kB | 9024 kB | [文件列表] |
| s390 | 2.0.0-1 | 3,366.4 kB | 8908 kB | [文件列表] |
| sparc | 2.0.0-1+b1 | 2,975.6 kB | 8736 kB | [文件列表] |