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[ 源代码: clustalw  ]

软件包: clustalw (2.0.9-1 以及其他的) [non-free]

global multiple nucleotide or peptide sequence alignment

This program performs an alignment of multiple nucleotide or amino acid sequences. It recognizes the format of input sequences and whether the sequences are nucleic acid (DNA/RNA) or amino acid (proteins). The output format may be selected from in various formats for multiple alignments such as Phylip or FASTA. Clustal W is very well accepted.

The output of Clustal W can be edited manually but preferably with an alignment editor like SeaView or within its companion Clustal X. When building a model from your alignment, this can be applied for improved database searches. The Debian package hmmer creates such in form of an HMM.

For details and citation purposes see paper "Clustal W and Clustal X version 2.0", Larkin M., et al. Bioinformatics 2007 23(21):2947-2948

标签: Biology: Clustal/ALN, biology::format:fasta, Nucleic Acids, Proteins, Field: Bioinformatics, Implemented in: C++, User Interface: Command Line, Text-based Interactive, Role: Program, Scope: Utility, Purpose: Comparing, Supports Format: Plain Text

其它与 clustalw 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: libc6 (>= 2.3.1-1) [m68k]
    GNU C 语言运行库：共享库
    同时作为一个虚包由这些包填实: libc6-udeb
    dep: libc6 (>= 2.7-1) [除 alpha, ia64, m68k]
  • dep: libc6.1 (>= 2.7-1) [alpha, ia64]
    GNU C 语言运行库：共享库
    同时作为一个虚包由这些包填实: libc6.1-udeb
  • dep: libgcc1 (>= 1:4.1.1) [除 arm, hppa, m68k]
    GCC支持库
    dep: libgcc1 (>= 1:4.3) [arm]
  • dep: libgcc4 (>= 4.1.1) [hppa]
    GCC支持库
  • dep: libstdc++6 (>= 4.2.1) [除 m68k]
    GNU 标准 C++ 库第三版
  • dep: libunwind7 (>= 0.98.5-6) [ia64]
    用于检测程序中的函数调用链的库 - 运行时
  • sug: clustalx
    GUI for Clustal W
  • sug: seaview
    Multiple sequence alignment editor

下载 clustalw

下载可用于所有硬件架构的
硬件架构 版本 软件包大小 安装后大小 文件
alpha 2.0.9-1 345.6 kB1036 kB [文件列表]
amd64 2.0.9-1 320.2 kB852 kB [文件列表]
arm 2.0.9-1 367.2 kB904 kB [文件列表]
hppa 2.0.9-1 357.8 kB864 kB [文件列表]
i386 2.0.9-1 306.4 kB824 kB [文件列表]
ia64 2.0.9-1 446.0 kB1476 kB [文件列表]
m68k 1.83-1 147.2 kB364 kB [文件列表]
mips 2.0.9-1 322.4 kB1080 kB [文件列表]
mipsel 2.0.9-1 321.8 kB1080 kB [文件列表]
powerpc 2.0.9-1 327.6 kB856 kB [文件列表]
s390 2.0.9-1 303.9 kB804 kB [文件列表]
sparc 2.0.9-1 339.9 kB920 kB [文件列表]