软件包: molphy (2.3b3-5) [non-free]

[ 源代码: molphy  ]

Program Package for MOLecular PHYlogenetics

ProtML is a main program in MOLPHY for inferring evolutionary trees from PROTein (amino acid) sequences by using the Maximum Likelihood method. Other programs (C language)

 NucML:  Maximum Likelihood Inference of Nucleic Acid Phylogeny
 ProtST: Basic Statistics of Protein Sequences
 NucST:  Basic Statistics of Nucleic Acid Sequences
 NJdist: Neighbor Joining Phylogeny from Distance Matrix

Utilities (Perl)

 mollist:  get identifiers list        molrev:   reverse DNA sequences
 molcat:   concatenate sequences       molcut:   get partial sequences
 molmerge: merge sequences             nuc2ptn:  DNA -> Amino acid
 rminsdel: remove INS/DEL sites        molcodon: get specified codon sites
 molinfo:  get varied sites            mol2mol:  MOLPHY format beautifer
 inl2mol:  Interleaved -> MOLPHY       mol2inl:  MOLPHY -> Interleaved
 mol2phy:  MOLPHY -> Sequential        phy2mol:  Sequential -> MOLPHY
 must2mol: MUST -> MOLPHY              etc.

标签: Field: Biology, Bioinformatics, Implemented in: C, User Interface: Command Line, Role: Program, Scope: Utility, Purpose: Analysing, Comparing

其他与 molphy 有关的软件包

• dep: libc6 (>= 2.7-1) [除 alpha, ia64]

  GNU C Library: Shared libraries
  同时作为一个虚包由这些包填实: libc6-udeb

• dep: libc6.1 (>= 2.7-1) [alpha, ia64]

  GNU C Library: Shared libraries
  同时作为一个虚包由这些包填实: libc6.1-udeb

• dep: perl

  Larry Wall 的实用抽取和报表语言（Practical Extraction and Report Language）

• sug: phylip

  [Biology] A package of programs for inferring phylogenies

下载 molphy

下载可用于所有硬件架构的

硬件架构	软件包大小	安装后大小	文件
alpha	298.1 kB	960.0 kB	[文件列表]
amd64	276.1 kB	876.0 kB	[文件列表]
arm	267.0 kB	832.0 kB	[文件列表]
armel	307.2 kB	912.0 kB	[文件列表]
hppa	291.2 kB	872.0 kB	[文件列表]
i386	236.0 kB	816.0 kB	[文件列表]
ia64	410.4 kB	1,432.0 kB	[文件列表]
mips	310.4 kB	1,024.0 kB	[文件列表]
mipsel	311.2 kB	984.0 kB	[文件列表]
powerpc	299.7 kB	908.0 kB	[文件列表]
s390	268.2 kB	856.0 kB	[文件列表]
sparc	268.5 kB	840.0 kB	[文件列表]