Package: tabix (0.2.6-1 and others)

Links for tabix

Debian Resources:

Download Source Package tabix:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Charles Plessy (QA Page)
Andreas Tille (QA Page)

External Resources:

Homepage [samtools.sourceforge.net]

Similar packages:

generic indexer for TAB-delimited genome position files

Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosme), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name.

Tags: Field: Biology, Implemented in: C, User Interface: interface::commandline, network::client, Network Protocol: FTP, HTTP, Role: role::program, scope::utility, Purpose: Compressing, Filtering, Works with: Text

Other Packages Related to tabix

depends

recommends

suggests

dep: libc0.1 (>= 2.7) [kfreebsd-amd64, kfreebsd-i386]

Embedded GNU C Library: Shared libraries
also a virtual package provided by libc0.1-udeb
dep: libc0.3 (>= 2.7) [hurd-i386]

Embedded GNU C Library: Shared libraries
also a virtual package provided by libc0.3-udeb
dep: libc6 (>= 2.11) [hppa]

Embedded GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb

dep: libc6 (>= 2.13) [s390x, sh4]

dep: libc6 (>= 2.13-28) [armhf]

dep: libc6 (>= 2.7) [not alpha, armhf, hppa, hurd-i386, ia64, kfreebsd-amd64, kfreebsd-i386, s390x, sh4]
dep: libc6.1 (>= 2.7) [alpha, ia64]

Embedded GNU C Library: Shared libraries
also a virtual package provided by libc6.1-udeb
dep: zlib1g (>= 1:1.1.4) [hppa]

compression library - runtime

dep: zlib1g (>= 1:1.2.3.3) [not hppa]

Download tabix

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	0.2.6-1	68.6 kB	182.0 kB	[list of files]
amd64	0.2.6-1	59.1 kB	148.0 kB	[list of files]
armel	0.2.6-1	55.6 kB	147.0 kB	[list of files]
armhf	0.2.6-1	53.4 kB	123.0 kB	[list of files]
hppa (unofficial port)	0.2.3-1	52.9 kB	160.0 kB	[list of files]
hurd-i386	0.2.6-1	62.6 kB	159.0 kB	[list of files]
i386	0.2.6-1	62.3 kB	159.0 kB	[list of files]
ia64	0.2.6-1	86.9 kB	246.0 kB	[list of files]
kfreebsd-amd64	0.2.6-1	59.2 kB	113.0 kB	[list of files]
kfreebsd-i386	0.2.6-1	62.2 kB	124.0 kB	[list of files]
m68k (unofficial port)	0.2.6-1	50.5 kB	147.0 kB	[list of files]
mips	0.2.6-1	65.3 kB	167.0 kB	[list of files]
mipsel	0.2.6-1	66.0 kB	167.0 kB	[list of files]
powerpc	0.2.6-1	61.1 kB	151.0 kB	[list of files]
powerpcspe (unofficial port)	0.2.6-1	56.1 kB	150.0 kB	[list of files]
s390	0.2.6-1	66.6 kB	163.0 kB	[list of files]
s390x	0.2.6-1	63.9 kB	168.0 kB	[list of files]
sh4 (unofficial port)	0.2.6-1	66.4 kB	155.0 kB	[list of files]
sparc	0.2.6-1	55.6 kB	156.0 kB	[list of files]
sparc64 (unofficial port)	0.2.6-1	57.9 kB	152.0 kB	[list of files]