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Package: arb (0.0.20071207.1-7 and others) [non-free]

Integrated package for sequence database handling and analysis

The ARB software is a graphically oriented package comprising various tools for sequence database handling and data analysis. A central database of processed (aligned) sequences and any type of additional data linked to the respective sequence entries is structured according to phylogeny or other user defined criteria.

The ARB project (latin, "arbor"=tree) is a joint initiative of the Lehrstuhl fuer Mikrobiologie http://www.mikro.biologie.tu-muenchen.de/ and the Lehrstuhl fuer Rechnertechnik und Rechnerorganisation http://wwwbode.informatik.tu-muenchen.de/ of the Technical University of Munich.

Tags: Field: Biology, Bioinformatics, Implemented in: C++, Perl, User Interface: X Window System, Role: Program, Scope: Application, Utility, Interface Toolkit: Lesstif/Motif, Purpose: Analysing, Comparing, Editing, Searching, X Window System: Application

Other Packages Related to arb

  • depends
  • recommends
  • suggests
  • dep: arb-common (= 0.0.20071207.1-6) [mipsel]
    Integrated package for sequence database handling and analysis
    dep: arb-common (= 0.0.20071207.1-7) [not mipsel]
  • dep: fastdnaml (>= 1.2.2-4)
    Tool for construction of phylogenetic trees of DNA sequences
  • dep: freeglut3
    OpenGL Utility Toolkit
  • dep: libarb (= 0.0.20071207.1-6) [mipsel]
    Integrated package for sequence database handling and analysis
    dep: libarb (= 0.0.20071207.1-7) [not mipsel]
  • dep: libc6 (>= 2.3.6-6~) [i386]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.4) [powerpc]
    dep: libc6 (>= 2.6) [sparc]
    dep: libc6 (>= 2.7-1) [mipsel]
  • dep: libgcc1 (>= 1:4.1.1)
    GCC support library
  • dep: libgl1-mesa-glx
    A free implementation of the OpenGL API -- GLX runtime
    or libgl1
    virtual package provided by libgl1-mesa-glx, libgl1-mesa-swx11
  • dep: libglew1.5 (>= 1.5.0dfsg1)
    The OpenGL Extension Wrangler - runtime environment
  • dep: libglu1-mesa
    The OpenGL utility library (GLU)
    or libglu1
    virtual package provided by libglu1-mesa
  • dep: libglw1-mesa
    A free implementation of the OpenGL API -- runtime
    or libglw1
    virtual package provided by libglw1-mesa
  • dep: libmotif3
    Open Motif - shared libraries
  • dep: libpng12-0 (>= 1.2.13-4)
    PNG library - runtime
  • dep: libstdc++6 (>= 4.2.1)
    The GNU Standard C++ Library v3
  • dep: libtiff4
    Tag Image File Format (TIFF) library
  • dep: libx11-6
    X11 client-side library
  • dep: libxext6
    X11 miscellaneous extension library
  • dep: libxp6
    X Printing Extension (Xprint) client library
  • dep: libxpm4
    X11 pixmap library
  • dep: libxt6
    X11 toolkit intrinsics library
  • dep: molphy
    Program Package for MOLecular PHYlogenetics
  • dep: phylip (>= 3.6b)
    package of programs for inferring phylogenies
  • dep: readseq (>= 1-1)
    [Biology] Conversion between sequence formats
  • dep: ssh
    secure shell client and server (metapackage)
  • dep: transfig
    Utilities for converting XFig figure files
  • dep: tree-puzzle (>= 5.0-3)
    Reconstruction of phylogenetic trees by maximum likelihood
  • dep: xviewg (>= 3.2p1.4-6)
    XView shared libraries
  • rec: xfig
    Facility for Interactive Generation of figures under X11
  • sug: arb-database
    Package not available
  • sug: gnuplot
    A command-line driven interactive plotting program
  • sug: gv
    PostScript and PDF viewer for X

Download arb

Download for all available architectures
Architecture Version Package Size Installed Size Files
i386 0.0.20071207.1-7 2,097.4 kB5168 kB [list of files]
mipsel 0.0.20071207.1-6 2,500.2 kB7220 kB [list of files]
powerpc 0.0.20071207.1-7 2,430.0 kB5892 kB [list of files]
sparc 0.0.20071207.1-7 2,176.3 kB5236 kB [list of files]