sid  ]
[ Source: arb  ]

Package: arb (0.0.20071207.1-2 and others) [non-free]

Integrated package for data handling and analysis

The ARB software is a graphically oriented package comprising various tools for sequence database handling and data analysis. A central database of processed (aligned) sequences and any type of additional data linked to the respective sequence entries is structured according to phylogeny or other user defined criteria.

The ARB project (latin, "arbor"=tree) is a joint initiative of the Lehrstuhl fuer Mikrobiologie http://www.mikro.biologie.tu-muenchen.de/ and the Lehrstuhl fuer Rechnertechnik und Rechnerorganisation http://wwwbode.informatik.tu-muenchen.de/ of the Technical University of Munich.

Tags: Field: Biology, Implemented in: C++, Perl, User Interface: X Window System, Role: Program, Scope: Utility, X Window System: Application

Other Packages Related to arb

  • depends
  • recommends
  • suggests
  • dep: arb-common (= 0.0.20050526-7) [sparc]
    Integrated package for data handling and analysis
    dep: arb-common (= 0.0.20071207.1-2) [i386]
  • dep: fastdnaml (>= 1.2.2-4)
    [Biology] Tool for construction of phylogenetic trees of DNA sequences
  • dep: freeglut3
    OpenGL Utility Toolkit
  • dep: libarb (= 0.0.20050526-7) [sparc]
    Integrated package for data handling and analysis
    dep: libarb (= 0.0.20071207.1-2) [i386]
  • dep: libc6 (>= 2.3.5-1) [sparc]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.7-1) [i386]
  • dep: libgcc1 (>= 1:4.0.2) [sparc]
    GCC support library
    dep: libgcc1 (>= 1:4.1.1-21) [i386]
  • dep: libgl1-mesa-glx [i386]
    A free implementation of the OpenGL API -- GLX runtime
    or libgl1
    virtual package provided by libgl1-mesa-glide3, libgl1-mesa-glx, libgl1-mesa-swx11
  • dep: libglew1 (>= 1.3.1) [sparc]
    Package not available
  • dep: libglew1.4 (>= 1.4.0dfsg) [i386]
    Package not available
  • dep: libglu1-mesa [i386]
    The OpenGL utility library (GLU)
    or libglu1
    virtual package provided by libglu1-mesa
  • dep: libglu1-xorg [sparc]
    transitional package for Debian etch
    or libglu1
    virtual package provided by libglu1-mesa
  • dep: libglw1-mesa [i386]
    A free implementation of the OpenGL API -- runtime
    or libglw1
    virtual package provided by libglw1-mesa
  • dep: libmotif3
    Open Motif - shared libraries
  • dep: libpng12-0 (>= 1.2.13-4) [i386]
    PNG library - runtime
    dep: libpng12-0 (>= 1.2.8rel) [sparc]
  • dep: libstdc++6 (>= 4.0.2-4) [sparc]
    The GNU Standard C++ Library v3
    dep: libstdc++6 (>= 4.2.1-4) [i386]
  • dep: libtiff4 [i386]
    Tag Image File Format (TIFF) library
  • dep: libx11-6 [i386]
    X11 client-side library
  • dep: libx11-6 [sparc]
    X11 client-side library
    or xlibs (>> 4.1.0)
    Package not available
  • dep: libxext6 [i386]
    X11 miscellaneous extension library
  • dep: libxext6 [sparc]
    X11 miscellaneous extension library
    or xlibs (>> 4.1.0)
    Package not available
  • dep: libxp6 [i386]
    X Printing Extension (Xprint) client library
  • dep: libxp6 [sparc]
    X Printing Extension (Xprint) client library
    or xlibs (>> 4.1.0)
    Package not available
  • dep: libxpm4 [i386]
    X11 pixmap library
  • dep: libxpm4 [sparc]
    X11 pixmap library
    or xlibs (>> 4.1.0)
    Package not available
  • dep: libxt6 [i386]
    X11 toolkit intrinsics library
  • dep: libxt6 [sparc]
    X11 toolkit intrinsics library
    or xlibs (>> 4.1.0)
    Package not available
  • dep: molphy
    Program Package for MOLecular PHYlogenetics
  • dep: phylip (>= 3.6b)
    [Biology] A package of programs for inferring phylogenies
  • dep: readseq (>= 1-1)
    [Biology] Conversion between sequence formats
  • dep: ssh
    secure shell client and server (metapackage)
  • dep: transfig
    Utilities for converting XFig figure files
  • dep: tree-puzzle (>= 5.0-3)
    Reconstruction of phylogenetic trees by maximum likelihood
  • dep: xlibmesa-gl [sparc]
    transitional package for Debian etch
    or libgl1
    virtual package provided by libgl1-mesa-glide3, libgl1-mesa-glx, libgl1-mesa-swx11
  • dep: xviewg (>= 3.2p1.4-6)
    XView shared libraries
  • rec: xfig
    Facility for Interactive Generation of figures under X11
  • sug: arb-database
    Package not available
  • sug: gnuplot
    A command-line driven interactive plotting program
  • sug: gv
    PostScript and PDF viewer for X

Download arb

Download for all available architectures
Architecture Version Package Size Installed Size Files
i386 0.0.20071207.1-2 2,105.5 kB5128 kB [list of files]
sparc 0.0.20050526-7 1,949.2 kB4788 kB [list of files]