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[ Source: hmmer2 ]
Package: hmmer2 (2.3.2-6)
Links for hmmer2
Debian Resources:
Download Source Package hmmer2:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Matthew Vernon (QA Page)
- Nelson A. de Oliveira (QA Page)
- Andreas Tille (QA Page)
- Charles Plessy (QA Page)
- Laszlo Kajan (QA Page)
External Resources:
- Homepage [hmmer.janelia.org]
Similar packages:
profile hidden Markov models for protein sequence analysis
HMMER is an implementation of profile hidden Markov model methods for sensitive searches of biological sequence databases using multiple sequence alignments as queries.
Given a multiple sequence alignment as input, HMMER builds a statistical model called a "hidden Markov model" which can then be used as a query into a sequence database to find (and/or align) additional homologues of the sequence family.
Other Packages Related to hmmer2
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- dep: libc0.1 (>= 2.7) [kfreebsd-amd64, kfreebsd-i386]
- Embedded GNU C Library: Shared libraries
also a virtual package provided by libc0.1-udeb
-
- dep: libc0.3 (>= 2.13-34) [hurd-i386]
- Embedded GNU C Library: Shared libraries
also a virtual package provided by libc0.3-udeb
-
- dep: libc6 (>= 2.13) [s390x, sh4]
- Embedded GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.13-28) [armhf]
- dep: libc6 (>= 2.7) [not alpha, armhf, hurd-i386, ia64, kfreebsd-amd64, kfreebsd-i386, s390x, sh4]
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- dep: libc6.1 (>= 2.7) [alpha, ia64]
- Embedded GNU C Library: Shared libraries
also a virtual package provided by libc6.1-udeb
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- dep: libpvm3
- Parallel Virtual Machine - shared libraries
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- rec: biosquid
- utilities for biological sequence analysis
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- sug: hmmer2-doc (>= 2.3.2-6)
- profile hidden Markov models for protein sequence analysis (docs)
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- sug: hmmer2-pvm (>= 2.3.2-6)
- HMMER programs with PVM (Parallel Virtual Machine) support
Download hmmer2
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| alpha (unofficial port) | 1,439.3 kB | 3,138.0 kB | [list of files] |
| amd64 | 1,231.7 kB | 2,484.0 kB | [list of files] |
| armel | 1,114.8 kB | 2,160.0 kB | [list of files] |
| armhf | 998.9 kB | 1,544.0 kB | [list of files] |
| hurd-i386 | 1,167.7 kB | 2,414.0 kB | [list of files] |
| i386 | 1,168.8 kB | 2,422.0 kB | [list of files] |
| ia64 | 1,974.8 kB | 5,381.0 kB | [list of files] |
| kfreebsd-amd64 | 1,231.5 kB | 2,453.0 kB | [list of files] |
| kfreebsd-i386 | 1,167.7 kB | 2,383.0 kB | [list of files] |
| m68k (unofficial port) | 930.1 kB | 2,014.0 kB | [list of files] |
| mips | 1,136.4 kB | 2,468.0 kB | [list of files] |
| mipsel | 1,147.8 kB | 2,468.0 kB | [list of files] |
| powerpc | 1,171.0 kB | 2,308.0 kB | [list of files] |
| powerpcspe (unofficial port) | 1,197.3 kB | 2,346.0 kB | [list of files] |
| s390 | 1,167.4 kB | 2,338.0 kB | [list of files] |
| s390x | 1,265.0 kB | 2,717.0 kB | [list of files] |
| sh4 (unofficial port) | 1,188.0 kB | 2,102.0 kB | [list of files] |
| sparc | 1,115.7 kB | 2,240.0 kB | [list of files] |