Package: autodock-vina (1.2.5-2 and others)

[ Source: autodock-vina  ]

docking of small molecules to proteins

AutoDock Vina is a program to support drug discovery, molecular docking and virtual screening of compound libraries. It offers multi-core capability, high performance and enhanced accuracy and ease of use.

The same institute also developed autodock, which is widely used.

O. Trott, A. J. Olson, AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization and multithreading, Journal of Computational Chemistry 31 (2010) 455-461

Other Packages Related to autodock-vina

• dep: libboost-filesystem1.74.0 (>= 1.74.0+ds1) [x32]

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-filesystem1.83.0 (>= 1.83.0) [not x32]

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-program-options1.74.0 (>= 1.74.0+ds1) [x32]

  program options library for C++

• dep: libboost-program-options1.83.0 (>= 1.83.0) [not x32]

  program options library for C++

• dep: libboost-system1.83.0 (>= 1.83.0) [sparc64]

  Operating system (e.g. diagnostics support) library

• dep: libboost-thread1.74.0 (>= 1.74.0+ds1) [x32]

  portable C++ multi-threading

• dep: libboost-thread1.83.0 (>= 1.83.0) [not x32]

  portable C++ multi-threading

• dep: libc6 (>= 2.34) [not alpha, ia64, sh4]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.3.1) [amd64, arm64, i386, mips64el, ppc64, ppc64el, s390x, x32]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4, sparc64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support library

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• sug: autodock

  analysis of ligand binding to protein structure

• sug: autogrid

  pre-calculate binding of ligands to their receptor

Download autodock-vina

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1.2.5-2+b1	237.5 kB	728.0 kB	[list of files]
amd64	1.2.5-2	261.0 kB	672.0 kB	[list of files]
arm64	1.2.5-2	231.7 kB	660.0 kB	[list of files]
armel	1.2.5-2	239.1 kB	638.0 kB	[list of files]
armhf	1.2.5-2	231.5 kB	474.0 kB	[list of files]
hppa (unofficial port)	1.2.5-2	247.2 kB	638.0 kB	[list of files]
i386	1.2.5-2	270.3 kB	698.0 kB	[list of files]
ia64 (unofficial port)	1.2.5-2	290.5 kB	1,237.0 kB	[list of files]
m68k (unofficial port)	1.2.5-2	232.1 kB	666.0 kB	[list of files]
mips64el	1.2.5-2	231.3 kB	753.0 kB	[list of files]
ppc64 (unofficial port)	1.2.5-2	262.2 kB	916.0 kB	[list of files]
ppc64el	1.2.5-2	265.9 kB	852.0 kB	[list of files]
riscv64	1.2.5-2	257.0 kB	576.0 kB	[list of files]
s390x	1.2.5-2	255.1 kB	680.0 kB	[list of files]
sh4 (unofficial port)	1.2.5-2	265.7 kB	659.0 kB	[list of files]
sparc64 (unofficial port)	1.2.5-2	217.1 kB	2,140.0 kB	[list of files]
x32 (unofficial port)	1.2.5-2	258.1 kB	634.0 kB	[list of files]