Package: picard-tools (1.27-1)
Links for picard-tools
Debian Resources:
Download Source Package picard-tools:
Maintainers:
External Resources:
- Homepage [picard.sourceforge.net]
Similar packages:
Command line tools to manipulate SAM and BAM files
SAM (Sequence Alignment/Map) format is a generic format for storing large nucleotide sequence alignments. Picard Tools includes these utilities to manipulate SAM and BAM files: BamToBfq MeanQualityByCycle BuildBamIndex MergeBamAlignment CalculateHsMetrics MergeSamFiles CleanSam NormalizeFasta CollectAlignmentSummaryMetrics QualityScoreDistribution CollectGcBiasMetrics ReplaceSamHeader CollectInsertSizeMetrics RevertSam CompareSAMs SamFormatConverter CreateSequenceDictionary SamToFastq EstimateLibraryComplexity SortSam FastqToSam ValidateSamFile FixMateInformation ViewSam MarkDuplicates
Other Packages Related to picard-tools
|
|
|
-
- dep: libsam-java (>= 1.27-1)
- Java library to manipulate SAM and BAM files
-
- dep: openjdk-6-jre
- OpenJDK Java runtime, using Hotspot JIT
- or java-runtime
- virtual package provided by default-jre, gcj-4.4-jre, gcj-jre, openjdk-6-jre, sun-java6-jre
-
- sug: python
- interactive high-level object-oriented language (default version)
-
- sug: r-base-core
- GNU R core of statistical computation and graphics system
Download picard-tools
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 253.5 kB | 764.0 kB | [list of files] |