alla flaggor
buster  ] [  bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ Källkod: mauve-aligner  ]

Paket: mauve-aligner (2.4.0+4736-6)

Länkar för mauve-aligner

Screenshot

Debianresurser:

Hämta källkodspaketet mauve-aligner:

Ansvariga:

Externa resurser:

Liknande paket:

multiple genome alignment

Mauve is a system for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion. Multiple genome alignment provides a basis for research into comparative genomics and the study of evolutionary dynamics. Aligning whole genomes is a fundamentally different problem than aligning short sequences.

Mauve has been developed with the idea that a multiple genome aligner should require only modest computational resources. It employs algorithmic techniques that scale well in the amount of sequence being aligned. For example, a pair of Y. pestis genomes can be aligned in under a minute, while a group of 9 divergent Enterobacterial genomes can be aligned in a few hours.

Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutition.

Mauve is developed at the University of Wisconsin.

Andra paket besläktade med mauve-aligner

  • beror
  • rekommenderar
  • föreslår
  • enhances

Hämta mauve-aligner

Hämtningar för alla tillgängliga arkitekturer
Arkitektur Paketstorlek Installerad storlek Filer
all 477,8 kbyte544,0 kbyte [filförteckning]