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[ Source: codonw  ]

Package: codonw (1.4.4-7)

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Correspondence Analysis of Codon Usage

CodonW is a package for codon usage analysis. It was designed to simplify Multivariate Analysis (MVA) of codon usage. The MVA method employed in CodonW is correspondence analysis (COA) (the most popular MVA method for codon usage analysis). CodonW can generate a COA for codon usage, relative synonymous codon usage or amino acid usage. Additional analyses of codon usage include investigation of optimal codons, codon and dinucleotide bias, and/or base composition. CodonW analyses sequences encoded by genetic codes other than the universal code.

Tags: Biology: Nucleic Acids, Field: Biology, field::biology:bioinformatics, implemented-in::c, User Interface: Command Line, interface::text-mode, role::program, Scope: Utility, Purpose: Analysing

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Download for all available architectures
Architecture Package Size Installed Size Files
amd64 137.5 kB419.0 kB [list of files]
arm64 133.8 kB479.0 kB [list of files]
armel 136.7 kB417.0 kB [list of files]
armhf 133.9 kB381.0 kB [list of files]
i386 140.8 kB433.0 kB [list of files]
mips64el 135.5 kB483.0 kB [list of files]
mipsel 135.7 kB481.0 kB [list of files]
ppc64el 143.5 kB479.0 kB [list of files]
s390x 134.1 kB419.0 kB [list of files]