Package: probcons (1.12-4)

Links for probcons

Debian Resources:

Download Source Package probcons:

Maintainers:

Debian-Med Packaging Team (QA Page, Mail Archive)
Charles Plessy (QA Page)
David Paleino (QA Page)

External Resources:

Homepage [probcons.stanford.edu]

Similar packages:

PROBabilistic CONSistency-based multiple sequence alignment

Tool for generating multiple alignments of protein sequences. Using a combination of probabilistic modeling and consistency-based alignment techniques, PROBCONS has achieved the highest accuracies of all alignment methods to date. On the BAliBASE benchmark alignment database, alignments produced by PROBCONS show statistically significant improvement over current programs, containing an average of 7% more correctly aligned columns than those of T-Coffee, 11% more correctly aligned columns than those of CLUSTAL W, and 14% more correctly aligned columns than those of DIALIGN. Probcons is published in Do, C.B., Mahabhashyam, M.S.P., Brudno, M., and Batzoglou, S. 2005. Genome Research 15: 330-340.

Tags: Field: Biology, Bioinformatics, Implemented in: C++, User Interface: Command Line, Role: Program, Scope: Utility, Purpose: Comparing, Supports Format: Plain Text

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dep: libgcc1 (>= 1:4.1.1-21) [amd64, i386, mips, mipsel, sparc]

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dep: libgcc1 (>= 1:4.2.1) [armel, ia64, powerpc, s390]
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dep: libstdc++6 (>= 4.2.1) [armel, hppa, ia64, powerpc, s390]

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sug: probcons-extra

Extra programs from the probcons package

Download probcons

Download for all available architectures
Architecture	Package Size	Installed Size	Files
amd64	180.8 kB	428 kB	[list of files]
armel	177.5 kB	404 kB	[list of files]
hppa	222.7 kB	440 kB	[list of files]
i386	155.1 kB	384 kB	[list of files]
ia64	317.3 kB	768 kB	[list of files]
mips	221.4 kB	528 kB	[list of files]
mipsel	223.0 kB	528 kB	[list of files]
powerpc	211.6 kB	428 kB	[list of files]
s390	172.3 kB	412 kB	[list of files]
sparc	181.6 kB	428 kB	[list of files]