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[ Source: ncbi-tools6  ]

Package: blast2 (1:2.2.21.20090809-1 and others)

Basic Local Alignment Search Tool

The famous sequence alignment program. This is "official" NCBI version, #2. The blastall executable allows you to give a nucleotide or protein sequence to the program. It is compared against databases and a summary of matches is returned to the user.

Note that databases are not included in Debian; they must be retrieved manually.

Tags: Field: Biology, Implemented in: C, User Interface: Command Line, Role: Program, Scope: Utility, Purpose: Searching

Other Packages Related to blast2

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.3.2) [amd64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.3.6-6~) [i386]
    dep: libc6 (>= 2.4) [armel, mips, mipsel, powerpc, s390]
    dep: libc6 (>= 2.5) [hppa]
    dep: libc6 (>= 2.6) [sparc]
  • dep: libc6.1 (>= 2.3.2) [ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6.1-udeb
  • dep: libgcc1 (>= 1:4.4.0) [armel]
    GCC support library
  • dep: libncbi6 (<< 6.1.20090809.1)
    NCBI libraries for biology applications
    dep: libncbi6 (>= 6.1.20090809)
  • sug: libvibrant6a
    NCBI libraries for graphic biology applications
  • sug: ncbi-rrna-data
    large rRNA BLAST databases distributed with the NCBI toolkit
  • sug: ncbi-tools-bin
    NCBI libraries for biology applications (text-based utilities)
  • sug: ncbi-tools-x11
    NCBI libraries for biology applications (X-based utilities)

Download blast2

Download for all available architectures
Architecture Version Package Size Installed Size Files
amd64 1:2.2.21.20090809-1 647.1 kB1298 kB [list of files]
armel 1:2.2.21.20090809-1+b1 629.0 kB1280 kB [list of files]
hppa 1:2.2.21.20090809-1 641.4 kB1276 kB [list of files]
i386 1:2.2.21.20090809-1 623.3 kB1256 kB [list of files]
ia64 1:2.2.21.20090809-1+b1 725.8 kB1708 kB [list of files]
mips 1:2.2.21.20090809-1 632.1 kB1340 kB [list of files]
mipsel 1:2.2.21.20090809-1 623.0 kB1340 kB [list of files]
powerpc 1:2.2.21.20090809-1 666.6 kB1404 kB [list of files]
s390 1:2.2.21.20090809-1 652.6 kB1316 kB [list of files]
sparc 1:2.2.21.20090809-1 634.2 kB1272 kB [list of files]