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[ Source: biosquid  ]

Package: biosquid (1.9g+cvs20050121-2)

utilities for biological sequence analysis

SQUID is a library of C code functions for sequence analysis. It also includes a number of small utility programs to convert, show statistics, manipulate and do other functions on sequence files.

The original name of the package is "squid", but since there is already a squid on the archive (a proxy cache), it was renamed to "biosquid".

Tags: Field: Biology, Bioinformatics, Implemented in: C, User Interface: Command Line, Role: Program, Scope: Utility, Purpose: Comparing, Data Conversion, Editing

Other Packages Related to biosquid

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.7-1) [not ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libc6.1 (>= 2.7-1) [ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6.1-udeb
  • rec: hmmer (>> 2.1.4)
    profile hidden Markov models for protein sequence analysis

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Architecture Package Size Installed Size Files
amd64 735.5 kB1616 kB [list of files]
armel 698.2 kB1488 kB [list of files]
hppa 776.8 kB1580 kB [list of files]
i386 659.8 kB1440 kB [list of files]
ia64 1,162.3 kB3252 kB [list of files]
mips 767.6 kB2064 kB [list of files]
mipsel 772.1 kB2064 kB [list of files]
powerpc 743.6 kB1696 kB [list of files]
s390 713.8 kB1568 kB [list of files]
sparc 667.9 kB1480 kB [list of files]