[ buster ] [ bullseye ] [ bookworm ] [ trixie ] [ sid ]

Source Package: unicycler (0.4.8+dfsg-2)

Links for unicycler

The following binary packages are built from this source package:

unicycler: hybrid assembly pipeline for bacterial genomes
unicycler-data: hybrid assembly pipeline for bacterial genomes (data package)

adep: debhelper-compat (= 12)

Package not available
adep: dh-python

Debian helper tools for packaging Python libraries and applications
adep: python3-all

package depending on all supported Python 3 runtime versions
adep: python3-setuptools

Python3 Distutils Enhancements
adep: default-jdk

Standard Java or Java compatible Development Kit
adep: bcftools

genomic variant calling and manipulation of VCF/BCF files
adep: bowtie2

ultrafast memory-efficient short read aligner
adep: miniasm

ultrafast de novo assembler for long noisy DNA sequencing reads
adep: ncbi-blast+

next generation suite of BLAST sequence search tools
adep: pilon

automated genome assembly improvement and variant detection tool
adep: racon

consensus module for raw de novo DNA assembly of long uncorrected reads
adep: samtools

processing sequence alignments in SAM, BAM and CRAM formats
adep: spades (>= 3.13.1)

genome assembler for single-cell and isolates data sets
adep: libseqan2-dev

C++ library for the analysis of biological sequences (development)
adep: zlib1g-dev

compression library - development

Debian Package Source Repository (VCS: Git): https://salsa.debian.org/med-team/unicycler.git
Debian Package Source Repository (Browsable): https://salsa.debian.org/med-team/unicycler