Package: hmmer (3.0-4)

Links for hmmer

Debian Resources:

Download Source Package hmmer:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Matthew Vernon (QA Page)
Nelson A. de Oliveira (QA Page)
Andreas Tille (QA Page)
Charles Plessy (QA Page)
Eric Talevich (QA Page)

External Resources:

Homepage [hmmer.janelia.org]

Similar packages:

profile hidden Markov models for protein sequence analysis

HMMER is an implementation of profile hidden Markov model methods for sensitive searches of biological sequence databases using multiple sequence alignments as queries.

Given a multiple sequence alignment as input, HMMER builds a statistical model called a "hidden Markov model" which can then be used as a query into a sequence database to find (and/or align) additional homologues of the sequence family.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::searching, works-with-format::plaintext, Works with: Databases

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podporná knižnica GCC

sug: hmmer-doc (>= 3.0-4)

profile hidden Markov models for protein sequence analysis (docs)

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Architecture	Package Size	Installed Size	Files
amd64	2,165.0 kB	4,615.0 kB	[list of files]
armel	1,886.7 kB	3,876.0 kB	[list of files]
armhf	1,657.2 kB	2,652.0 kB	[list of files]
i386	2,165.5 kB	4,748.0 kB	[list of files]
ia64	3,087.4 kB	9,014.0 kB	[list of files]
kfreebsd-amd64	2,165.2 kB	4,584.0 kB	[list of files]
kfreebsd-i386	2,165.4 kB	4,716.0 kB	[list of files]
mips	1,893.1 kB	4,431.0 kB	[list of files]
mipsel	1,913.6 kB	4,447.0 kB	[list of files]
powerpc	1,921.7 kB	4,116.0 kB	[list of files]
s390	1,969.2 kB	4,198.0 kB	[list of files]
s390x	2,041.0 kB	4,633.0 kB	[list of files]
sparc	1,801.8 kB	3,899.0 kB	[list of files]