Package: velvet (1.0.02~nozlibcopy-1)

[ Source: velvet  ]

Nucleic acid sequence assembler for very short reads

Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.

Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs.

Tags: Biology: Nucleic Acids, Field: Biology, Bioinformatics, Implemented in: C, User Interface: Command Line, Role: Program, Purpose: Analysing

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Download velvet

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Architecture	Package Size	Installed Size	Files
amd64	654.5 kB	1,312.0 kB	[list of files]
armel	666.7 kB	1,316.0 kB	[list of files]
i386	665.2 kB	1,316.0 kB	[list of files]
ia64	789.8 kB	2,320.0 kB	[list of files]
kfreebsd-amd64	654.9 kB	1,250.0 kB	[list of files]
kfreebsd-i386	666.1 kB	1,280.0 kB	[list of files]
mips	711.6 kB	1,588.0 kB	[list of files]
mipsel	712.0 kB	1,588.0 kB	[list of files]
powerpc	689.2 kB	1,388.0 kB	[list of files]
s390	693.9 kB	1,388.0 kB	[list of files]
sparc	673.0 kB	1,356.0 kB	[list of files]