Package: bioperl-run (1.6.1-1)

[ Source: bioperl-run  ]

Wrapper modules for BioPerl

Contains modules that provide a Perl interface to various bioinformatics applications to allow them to be used with common BioPerl objects.

Not all the wrappable applications are packaged in Debian. The ones that are are "Suggested" by this package.

Tags: Field: Biology, Bioinformatics, Implemented in: Perl, User Interface: Command Line, Role: Program

Other Packages Related to bioperl-run

• dep: bioperl (>= 1.6.0)

  Perl tools for computational molecular biology

• rec: libalgorithm-diff-perl

  module to find differences between files

• rec: libio-string-perl

  Emulate IO::File interface for in-core strings

• rec: libipc-run-perl

  Perl module for running processes

• rec: libxml-twig-perl

  modul Perlu na spracovanie obrovských XML dokumentov v režime stromu

• sug: amap-align

  Protein multiple alignment by sequence annealing

• sug: blast2

  Basic Local Alignment Search Tool

• sug: clustalw

  global multiple nucleotide or peptide sequence alignment

• sug: emboss

  the european molecular biology open software suite

• sug: exonerate

  generic tool for pairwise sequence comparison

• sug: hmmer

  profile hidden Markov models for protein sequence analysis

• sug: molphy

  Program Package for MOLecular PHYlogenetics

• sug: phylip

  package of programs for inferring phylogenies

• sug: sim4

  tool for aligning cDNA and genomic DNA

• sug: t-coffee

  Multiple Sequence Alignment

• sug: wise

  comparison of biopolymers, commonly DNA and protein sequences

Download bioperl-run

Download for all available architectures

Architecture	Package Size	Installed Size	Files
all	678.6 kB	2,136.0 kB	[list of files]