Package: proda (1.0-14)

[ Source: proda  ]

multiple alignment of protein sequences

ProDA is a system for automated detection and alignment of homologous regions in collections of proteins with arbitrary domain architectures. Given an input set of unaligned sequences, ProDA identifies all homologous regions appearing in one or more sequences, and returns a collection of local multiple alignments for these regions.

Tags: Biology: Proteins, Field: Biology, field::biology:bioinformatics, implemented-in::c++, User Interface: Command Line, Role: role::program, scope::utility, Purpose: Analysing, use::comparing, works-with-format::plaintext, Works with: Need an extra tag

Other Packages Related to proda

• dep: libc6 (>= 2.34) [not alpha, ia64, sh4]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [not armel, armhf, hppa, ia64, m68k, sh4]

  GCC support library

  dep: libgcc-s1 (>= 3.3.4) [sh4]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support library

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

Download proda

Download for all available architectures

Architecture	Package Size	Installed Size	Files
alpha (unofficial port)	61.7 kB	215.0 kB	[list of files]
amd64	63.9 kB	158.0 kB	[list of files]
arm64	56.0 kB	214.0 kB	[list of files]
armel	53.2 kB	146.0 kB	[list of files]
armhf	53.3 kB	110.0 kB	[list of files]
hppa (unofficial port)	59.4 kB	159.0 kB	[list of files]
i386	63.5 kB	162.0 kB	[list of files]
ia64 (unofficial port)	78.0 kB	315.0 kB	[list of files]
m68k (unofficial port)	56.6 kB	158.0 kB	[list of files]
mips64el	65.9 kB	222.0 kB	[list of files]
ppc64 (unofficial port)	67.9 kB	215.0 kB	[list of files]
ppc64el	68.4 kB	214.0 kB	[list of files]
riscv64	62.6 kB	126.0 kB	[list of files]
s390x	66.9 kB	170.0 kB	[list of files]
sh4 (unofficial port)	68.3 kB	150.0 kB	[list of files]
sparc64 (unofficial port)	54.8 kB	1,048.0 kB	[list of files]
x32 (unofficial port)	62.4 kB	154.0 kB	[list of files]